PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0438.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 286aa    MW: 31532.9 Da    PI: 5.9081
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0438.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.23.8e-24120178259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                           Dgy+WrKYGqK++ ++++pr+Y++Ct + +C++ k+v++ ++dp + +it +g+H++e
  Kaladp0024s0438.1.p 120 ADGYAWRKYGQKPILNAKHPRNYFKCTNSpHCQALKRVQQMDDDPPMYKITCTGHHTCE 178
                          7**************************999***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182902.09E-23111178IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.7E-25111179IPR003657WRKY domain
PROSITE profilePS5081118.406114175IPR003657WRKY domain
SMARTSM007742.5E-30119179IPR003657WRKY domain
PfamPF031062.7E-23121178IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MNPCRPESCL SADGELHVSD ELRRGRQAAT ELLGLIRQQT YLSTPNAPSS LSPDPATGLV  60
MRIIDSFSNS LSMLGCQESA PARGPSESNK NSSSSSGGRK CVKPRRGDYT WTQVTSTLVA  120
DGYAWRKYGQ KPILNAKHPR NYFKCTNSPH CQALKRVQQM DDDPPMYKIT CTGHHTCENL  180
SNPSSLVNDM ASSIMVNFEM SKNDEKSNSA DRIATDLSPP QFRRVKEEES KNHQPGSSYS  240
THDNLPIVEN VETAAMTSPK DEQWSSLDDF DYLIGSLEFN EDASS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-24WRKY DNA-binding protein 70